Getting Started¶
Warning
Important: This is the documentation of code no longer in active development This is the link to the current docs: covid19-inference
Installation¶
There exists three different possiblities to run the models:
- Clone the repository:
git clone https://github.com/Priesemann-Group/covid19_inference_forecast
- Install the module via pip
pip install git+https://github.com/Priesemann-Group/covid19_inference_forecast.git
3. Run the notebooks directly in Google Colab. At the top of the notebooks files there should be a symbol which opens them directly in a Google Colab instance.
First Steps¶
To get started, we recommend to look at one of the currently two example notebooks:
- SIR model with changes points
- This model is extensively discussed in our paper: Inferring COVID-19 spreading rates and potential change points for case number forecasts
- SEIR-like model with extensions
- The second notebook runs a probably more realistic SEIR-like model. Details are found in the reference guide Models .